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Wolfson Research Institute for Health and Wellbeing

Staff

Dr Adetayo Kasim - all publications

Authored book

Chapter in book

  • Kasim, A., Hochreiter, S. & Shkedy, Z. (2016). δ-biclustering and FLOC algorithm. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 37-48.
  • Perualila, N.J., Shkedy, Z., Ravindranath, A.C., Drakakis, G., Liggi, S., Bender, A., Kasim, A., QSTAR Consortium, Talloen, W. & Goehlmann, H.W.H. (2016). Biclustering methods in chemoinformatics and molecular modelling. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 175-192.
  • Perualila, N.J., Shkedy, Z., Cabrera, J., Amaratunga, D. & Kasim, A. (2016). Enrichment of gene expression modules. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 203-222.
  • Amaratunga, D., Cabrera, J., Perualila, N.J., Kasim, A. & Shkedy, Z. (2016). From cluster analysis to biclustering. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 11-34.
  • Talloen, W., Goehlmann, H.W.H., Verbist, B., Perualila, N.J., Kasim, A., Shkedy, Z. & and QSTAR Consortium (2016). Gene expression experiments in drug discovery. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 159-174.
  • Perualila, N.J., Shkedy, Z., Sengupta, R., Bigirumurame, T., Bijnens, L., Talloen, W., Verbist, B., Goehlmann, H.W.H., QSTAR Consortium & Kasim, A. (2016). High dimensional biomarkers in drug discovery: The QSTAR Framework. In Applied Surrogate Endpoint Evaluation Methods with SAS and R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press.
  • Kasim, A. & Shkedy, Z. (2016). Iterative signature algorithm. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 119-130.
  • Otava, M., Verheyen R.G., Shkedy, Z., Talloen, W. & Kasim, A. (2016). Pattern discovery in high-dimensional problems. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 277-294.
  • Kasim, A., Pramana, S. & Shkedy, Z. (2016). Spectral biclustering. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 89-98.
  • De Troyer, E., Otava, M., Zhang, J.D., Pramana, S., Khamiakova, T., Kaiser, S., Sill, M., Culhane, A., Gusenleitner, D., Gestraud, P., Csardi, G., Aregay, M., Hochreiter, S., Klambauer, G., Clevert, D.A., Verbeke, T., Perualila, N.J., Kasim, A. & Shkedy, Z. (2016). The biclustGui package. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 321-348.
  • De Troyer, E., Sengupta, S., Otava, M., Zhang, J.D., Kaiser, S., Culhane, A., Gusenleitner, D., Gestraud, P., Csardi, G., Hochreiter, S., Klambauer, G., Clevert, D.A., Perualila, N.J., Kasim, A. & Shkedy, Z. (2016). The biclustGui Shiny App. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 373-384.
  • Shkedy, Z., De Troyer, E., Kasim A., Hochreiter, S. & Turner, H. (2016). The Plaid Model. In Applied Biclustering Methods for High Dimensional Data Using R. Kasim, A., Shkedy, Z., Kaiser, S., Hochreiter, S. & Talloen, W. Boca Raton: CRC Press. 73-88.
  • Kasim, A, Van Sanden, S, Otava, M, Hochreirter, S, Clevert, DA, Talloen, W & Lin, D (2012). δ-biclustering of Monotone Profiles. In Modelling Dose-Response Microarray Data in Early Drug Development Experiments using R. Lin, D., Shkedy, Z., Yekutieli, D., Amaratunga, D. & Bijnens, L Springer. 135-149.
  • Kasim, A, Shkedy, Z & Kato, B (2012). Estimation and inference under simple order restrictions: Hierarchical Bayesian Approach. In Modeling Dose-response Microarray Data in Early Drug Development Experiments Using R. Lin, D., Shkedy, Z., Yekutieli, D., Amaratunga, D. & Bijnens, L. Springer. 193-213.
  • Khamiakova, T., Kasim, A. & Shkedy, Z. (Accepted). ‘Integrative analysis of miRNA and mRNA Data’. In Applied Biclustering Methods for High Dimensional Data Using R.

Conference Paper

  • Akowuah, E., Hancock, H., Maier R., Kasim, A., Goodwin A., Owens, W.A., Mason, J. & Murphy, G. (2017), Manubrium-limited ministernotomy versus conventional sternotomy for aortic valve replacement: A randomised controlled trial (MAVRIC), Society for Cardiothoracic Surgery Annual Meeting. Belfast, Northern Ireland.
  • Yiannakou, Y., Etherson, K., Close, H., Kasim, A., Mercer-Jones, M., Plusa, S., Maier, R., Green, S., Cundall, J., Knowles, C. & Mason, J. (2016), Tined lead test stimulation to predict long-term benefit from sacral nerve stimulation in patients with chronic constipation (TiLTS-cc trial), European Society of Coloproctology. Milan, Italy.
  • Kasim A., Skhedy Z., Lin D., Van Sanden S., Cortinas J., Gohlmann H.W., Bijnens L., Yekutieli D., Camilleri M., Aerssens J. & Talloen W. (2010), Translating Gene Signatures Across Tissues: A Statistical View, in Arabnia, Hamid R. & Tran, Quoc-Nam. eds, 1: WORLDCOMP'10: The 2010 International Conference on Bioinformatics and Computational Biology. Las Vegas, CSREA Press, Las Vegas, 298-301.

Journal Article

Presentation

  • Merrell, C., Sayal, K., Tymms, P. & Kasim, A. (2015), The Impact of Inattention, Hyperactivity and Impulsivity on Children’s Attainment at Age 11, American Educational Research Association Annual Meeting. Chicago

Report

  • Menzies, V., Kasim, A., Kokotsaki, D., Hewitt, C., Akhter, N., Collyer, C., Younger, K., Wiggins, A. & Torgerson, C. (2016). Hallé SHINE on Manchester: Evaluation report and executive summary. Education Endowment Foundation.
  • Husain, F., Jabin, N., Haywood, S., Kasim, A. & Paylor, J. (2016). Parent Academy: Evaluation report and executive summary.
  • Merrell, C. & Kasim A. (2015). Butterfly Phonics: Evaluation report and executive summary.
  • King, B. & Kasim, A. (2015). Rapid Phonics.